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SRX1954111: Pachysolen tannophilus NRRL Y-2460
1 ILLUMINA (Illumina Genome Analyzer II) run: 27.7M spots, 4.2G bases, 1.6Gb downloads

External Id: JGI-SRA-20323
Submitted by: DOE Joint Genome Institute (JGI)
Study: Yeasts of biotechnological, taxonomic and physiological interest
show Abstracthide Abstract
An osmotolerant yeast with the rare ability to ferment D-xylose to ethanol known in fewer than 10 species. Uniquely, it also uses nitrate. This species is only distantly related to other xylose fermenters and will be useful in tracking changes among xylose fermenters. <i>Scheffersomyces</i> (<i>Pichia</i>) <i>stipitis</i> NRRL Y-7124 (Type) has shown substantial physiological differences from the previously sequenced strain CBS 6054 (e.g, reported xylanase activity not present in CBS 6054 and differences in cellobiose utilization). We hope to identify additional sugar transporters and understand better the regulatory differences that enable one of these two strains to ferment xylose faster, and the other to be able to ferment cellobiose faster. The yeast has a holdfast, an unusual structure in yeasts when it grows attached to the gut of wood-ingesting beetles.
Sample: Generic sample from Pachysolen tannophilus NRRL Y-2460
SAMN00016633 • SRS084610 • All experiments • All runs
Library:
Name: GPWZ
Instrument: Illumina Genome Analyzer II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Construction protocol: Solexa paired ends
Runs: 1 run, 27.7M spots, 4.2G bases, 1.6Gb
Run# of Spots# of BasesSizePublished
SRR392718927,749,0854.2G1.6Gb2016-07-16

ID:
2814697

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